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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015870859.1_cds_XP_016434251.1_30329
CDS Infomation

[gene=LOC107760680] [db_xref=GeneID:107760680] [protein=RING-H2 finger protein ATL20-like] [protein_id=XP_016434251.1] [location=complement(join(10836..11290,13930..14252,14806..15194))] [gbkey=CDS]
Sequence

ATGGAAACCACAGAGCTTAACCTGAAGATTAATCTCATAATCTTCTTTTTCTTCCTTAAT
CTTTTTCCAGTTTACTCTGTTGATGTTTGCAACCCAACTGTATGTTCAGAAGTGGGTATG
GGACCGGAAATCCGGTTTCCTTTCCGGCTAAAAAACCGGCAACCGGACCGGTGTGGGTAC
CCCGGTTTTGATCTTTCATGTAATGAGAGAGGCCAAACAATTATAACACTTCCTTTTTCA
GGTGATTTTCTAGTTATAGATATTGATTACACTGCACAATCTATTATACTTTATGATCCA
GATTTCTGCCTTGTGAAAAGACTCATCGATTTCAATATTACGAATTCTCCCTTCAGAGCT
GCTCATCAAAGAAATTACACAATTGTCAGGTGTACTTCGGATGATTGGCTAAATTACCCA
AATTATCAGGTGGCGATTCGGTTATCTTGCCGGGGATTTTCGAGCAGAAATCAGGCGATT
TTAGCTATGCCACCAAATATGTATGCACAAGGAAAGCCACCAGGTTGCAAGTTAATGTCA
AAGGTTTCAGTTCCTTTGCAATTGGAAGATAACTTTTGGTCTCCAATGGAGGGTCTTTTG
CTAACTTGGAGTGAACCCAGTTGTAGGATTTGTGAAAATCAAGGGAAACTTTGTGGGTTT
AAAAGTGATACTGGATCTGATATTGCTTGTTCTAATCCTCCCTCTTCTAAAGGATTACCC
AGGGGTGCCAAATATGGCATTATAATTGGAGTTGGAGTACCAGGTTTTGTATGCTTATTA
GGATTAATAAGCTTTGCTTTTGGTAAGATCAAGGTTTATGCCCTCCGCCGTGATTTGAAC
TCTGATCTCCCTACCACCATTAATCTACAATTAGCAATCGCGACGACAGGTCTTAACAAG
GCAACCATTGATTCCTATCCCAAGATCGTGCTCGGGGAAAGCAAGCGCCTTCCTAACCCC
AACGATGGCACATGTCCGATATGTCTATCAGATTACCAGCCTAAAGAAACCTTAAGAACC
ATACCAGAATGCAACCATTATTATCATGCTCAATGCATAGATGAATGGCTTAAGCTCAAT
GCTACTTGCCCCTTATGTCGAAATACGCCAGATGGTTCTTTACATCCTTGCTCATCATCA
ACTTCTTTGGTCTCATCTTCTCCATAG

Peptide Sequence

PEP ID

XP_016434251.1
PEP Infomation

PREDICTED: RING-H2 finger protein ATL20-like [Nicotiana tabacum]
Sequence

METTELNLKINLIIFFFFLNLFPVYSVDVCNPTVCSEVGMGPEIRFPFRLKNRQPDRCGY
PGFDLSCNERGQTIITLPFSGDFLVIDIDYTAQSIILYDPDFCLVKRLIDFNITNSPFRA
AHQRNYTIVRCTSDDWLNYPNYQVAIRLSCRGFSSRNQAILAMPPNMYAQGKPPGCKLMS
KVSVPLQLEDNFWSPMEGLLLTWSEPSCRICENQGKLCGFKSDTGSDIACSNPPSSKGLP
RGAKYGIIIGVGVPGFVCLLGLISFAFGKIKVYALRRDLNSDLPTTINLQLAIATTGLNK
ATIDSYPKIVLGESKRLPNPNDGTCPICLSDYQPKETLRTIPECNHYYHAQCIDEWLKLN
ATCPLCRNTPDGSLHPCSSSTSLVSSSP

Transcript Sequence

Gene sequence data has not been registered.